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use "minimised" in a sentence
Selecting biologically relevant conformations The conformations generated were minimised using ENCAD [ 36 ] and scored using a combination of scoring functions that hierarchically reduces the total number of conformations produced to one final conformation.
The scoring functions used for the final filtering include the all-atom function [ 32 ] , hydrophobic compactness [ 40 ] , a simple residue-residue contact function [ 44 ] , a density-scoring function that is based on the distance of a conformation to all its relatives in the conformation pool, contact order [ 45 ] , a secondary structure based scoring function that evaluates the match between the predicted structure and the secondary structure of a final energy-minimised conformation, and standard physics-based electrostatics and Van der Waals terms [ 46 ] .
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